Dear All, I want to use the .fld directory (includes 12 .fld files as P0000000.fld etc. and one Info.xml file) of an analysis (run with 12 processors) as initial condition to another analysis. I've changed the name of the file from /*Re_1000_v2.fld*/ to /*Re_1000_v2.rst*/ and generated an initlal condition part in my .xml file as follows: /*<FUNCTION NAME="InitialConditions">*//* *//* <F VAR="u" FILE="Re_1000_v2.rst/" />*//* *//* <F VAR="v" FILE="Re_1000_v2.rst/" />*//* *//* <F VAR="w" FILE="Re_1000_v2.rst/" />*//* *//* <F VAR="p" FILE="Re_1000_v2.rst/" />*//* *//* </FUNCTION>*/ but I'm getting segmentation fault as follows: /*mpirun noticed that process rank 1 with PID 98467 on node levrek1.yonetim exited on signal 11 (Segmentation fault)*/ Am I doing something wrong about restarting by using a .fld directory? What is the way of doing this? Regards, Kamil
Hi Kamil, The issue may be arising from the use of the trailing /. You can try, for example: <FUNCTION NAME="InitialConditions"> <F VAR="u" FILE="Re_1000_v2.rst" /> <F VAR="v" FILE="Re_1000_v2.rst" /> <F VAR="w" FILE="Re_1000_v2.rst" /> <F VAR="p" FILE="Re_1000_v2.rst" /> </FUNCTION> note that there is also a shortened syntax you can use: <FUNCTION NAME="InitialConditions"> <F VAR="u,v,w,p" FILE="Re_1000_v2.rst" /> </FUNCTION> If this still causes a segmentation fault then let us know. Cheers, Dave
On 10 Nov 2014, at 10:56, Kamil Ozden <kamil.ozden.me@gmail.com> wrote:
Dear All,
I want to use the .fld directory (includes 12 .fld files as P0000000.fld etc. and one Info.xml file) of an analysis (run with 12 processors) as initial condition to another analysis. I've changed the name of the file from Re_1000_v2.fld to Re_1000_v2.rst and generated an initlal condition part in my .xml file as follows:
<FUNCTION NAME="InitialConditions"> <F VAR="u" FILE="Re_1000_v2.rst/" /> <F VAR="v" FILE="Re_1000_v2.rst/" /> <F VAR="w" FILE="Re_1000_v2.rst/" /> <F VAR="p" FILE="Re_1000_v2.rst/" /> </FUNCTION>
but I'm getting segmentation fault as follows:
mpirun noticed that process rank 1 with PID 98467 on node levrek1.yonetim exited on signal 11 (Segmentation fault)
Am I doing something wrong about restarting by using a .fld directory? What is the way of doing this?
Regards, Kamil _______________________________________________ Nektar-users mailing list Nektar-users@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/nektar-users
-- David Moxey (Research Associate) d.moxey@imperial.ac.uk | www.imperial.ac.uk/people/d.moxey Room 363, Department of Aeronautics, Imperial College London, London, SW7 2AZ, UK.
Hi Dr. Moxey, The issue is solved by removing the trailing /. Thanks for your help. Regards, Kamil On 10-11-2014 13:01, David Moxey wrote:
Hi Kamil,
The issue may be arising from the use of the trailing /. You can try, for example:
<FUNCTION NAME="InitialConditions"> <F VAR="u" FILE="Re_1000_v2.rst" /> <F VAR="v" FILE="Re_1000_v2.rst" /> <F VAR="w" FILE="Re_1000_v2.rst" /> <F VAR="p" FILE="Re_1000_v2.rst" /> </FUNCTION>
note that there is also a shortened syntax you can use:
<FUNCTION NAME="InitialConditions"> <F VAR="u,v,w,p" FILE="Re_1000_v2.rst" /> </FUNCTION>
If this still causes a segmentation fault then let us know.
Cheers,
Dave
On 10 Nov 2014, at 10:56, Kamil Ozden <kamil.ozden.me@gmail.com> wrote:
Dear All,
I want to use the .fld directory (includes 12 .fld files as P0000000.fld etc. and one Info.xml file) of an analysis (run with 12 processors) as initial condition to another analysis. I've changed the name of the file from Re_1000_v2.fld to Re_1000_v2.rst and generated an initlal condition part in my .xml file as follows:
<FUNCTION NAME="InitialConditions"> <F VAR="u" FILE="Re_1000_v2.rst/" /> <F VAR="v" FILE="Re_1000_v2.rst/" /> <F VAR="w" FILE="Re_1000_v2.rst/" /> <F VAR="p" FILE="Re_1000_v2.rst/" /> </FUNCTION>
but I'm getting segmentation fault as follows:
mpirun noticed that process rank 1 with PID 98467 on node levrek1.yonetim exited on signal 11 (Segmentation fault)
Am I doing something wrong about restarting by using a .fld directory? What is the way of doing this?
Regards, Kamil _______________________________________________ Nektar-users mailing list Nektar-users@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/nektar-users
-- David Moxey (Research Associate) d.moxey@imperial.ac.uk | www.imperial.ac.uk/people/d.moxey
Room 363, Department of Aeronautics, Imperial College London, London, SW7 2AZ, UK.
Hi Kamil, No problem. I will raise a ticket so that we can fix this for the future, or at least suggest a helpful error message! Thanks, Dave
On 10 Nov 2014, at 11:19, Kamil Ozden <kamil.ozden.me@gmail.com> wrote:
Hi Dr. Moxey,
The issue is solved by removing the trailing /. Thanks for your help.
Regards, Kamil
On 10-11-2014 13:01, David Moxey wrote:
Hi Kamil,
The issue may be arising from the use of the trailing /. You can try, for example:
<FUNCTION NAME="InitialConditions"> <F VAR="u" FILE="Re_1000_v2.rst" /> <F VAR="v" FILE="Re_1000_v2.rst" /> <F VAR="w" FILE="Re_1000_v2.rst" /> <F VAR="p" FILE="Re_1000_v2.rst" /> </FUNCTION>
note that there is also a shortened syntax you can use:
<FUNCTION NAME="InitialConditions"> <F VAR="u,v,w,p" FILE="Re_1000_v2.rst" /> </FUNCTION>
If this still causes a segmentation fault then let us know.
Cheers,
Dave
On 10 Nov 2014, at 10:56, Kamil Ozden <kamil.ozden.me@gmail.com> wrote:
Dear All,
I want to use the .fld directory (includes 12 .fld files as P0000000.fld etc. and one Info.xml file) of an analysis (run with 12 processors) as initial condition to another analysis. I've changed the name of the file from Re_1000_v2.fld to Re_1000_v2.rst and generated an initlal condition part in my .xml file as follows:
<FUNCTION NAME="InitialConditions"> <F VAR="u" FILE="Re_1000_v2.rst/" /> <F VAR="v" FILE="Re_1000_v2.rst/" /> <F VAR="w" FILE="Re_1000_v2.rst/" /> <F VAR="p" FILE="Re_1000_v2.rst/" /> </FUNCTION>
but I'm getting segmentation fault as follows:
mpirun noticed that process rank 1 with PID 98467 on node levrek1.yonetim exited on signal 11 (Segmentation fault)
Am I doing something wrong about restarting by using a .fld directory? What is the way of doing this?
Regards, Kamil _______________________________________________ Nektar-users mailing list Nektar-users@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/nektar-users
-- David Moxey (Research Associate) d.moxey@imperial.ac.uk | www.imperial.ac.uk/people/d.moxey
Room 363, Department of Aeronautics, Imperial College London, London, SW7 2AZ, UK.
-- David Moxey (Research Associate) d.moxey@imperial.ac.uk | www.imperial.ac.uk/people/d.moxey Room 363, Department of Aeronautics, Imperial College London, London, SW7 2AZ, UK.
participants (2)
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                David Moxey
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                Kamil Ozden