Nektar++ running problem with .xml files including curved edges
Dear All, About 3 weeks ago I made an update in my computer and after that installed the last version of Nektar in the repository without problem. However, after this installation when I tried to run an analysis with an xml file including Curved edges I got the following error: Initial Conditions: - Field u: 0 - Field v: 0 - Field w: 1 - Field p: 0 Writing: "Re100_v11_2_0.chk" [Dell-Workstation:56500] *** Process received signal *** [Dell-Workstation:56500] Signal: Segmentation fault (11) [Dell-Workstation:56500] Signal code: Address not mapped (1) [Dell-Workstation:56500] Failing at address: 0x9a1b000 [Dell-Workstation:56500] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36c30) [0x7f5d2d442c30] [Dell-Workstation:56500] [ 1] /usr/lib/libblas.so.3(dgemm_incopy_NEHALEM+0x39e) [0x7f5d2e9a979e] [Dell-Workstation:56500] *** End of error message *** Segmentation fault (core dumped) What may be the reason for this error? Regards, Kamil
Dear Kamil, Unfortunately, the information you provide is not sufficient to diagnose the problem. Please ensure your code is compiled with CMAKE_BUILD_TYPE=Debug and run the code using a debugger (e.g. gdb). When the error occurs, request a backtrace (command: bt). Please send us the backtrace, along with the XML file you are using. For a quick introduction to gdb, have a look at http://undergraduate.csse.uwa.edu.au/units/CITS2230/resources/gdb-intro.html Kind regards, Chris On 29/09/14 08:44, Kamil Ozden wrote:
Dear All,
About 3 weeks ago I made an update in my computer and after that installed the last version of Nektar in the repository without problem. However, after this installation when I tried to run an analysis with an xml file including Curved edges I got the following error:
Initial Conditions: - Field u: 0 - Field v: 0 - Field w: 1 - Field p: 0 Writing: "Re100_v11_2_0.chk" [Dell-Workstation:56500] *** Process received signal *** [Dell-Workstation:56500] Signal: Segmentation fault (11) [Dell-Workstation:56500] Signal code: Address not mapped (1) [Dell-Workstation:56500] Failing at address: 0x9a1b000 [Dell-Workstation:56500] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36c30) [0x7f5d2d442c30] [Dell-Workstation:56500] [ 1] /usr/lib/libblas.so.3(dgemm_incopy_NEHALEM+0x39e) [0x7f5d2e9a979e] [Dell-Workstation:56500] *** End of error message *** Segmentation fault (core dumped)
What may be the reason for this error?
Regards, Kamil
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-- Chris Cantwell Department of Aeronautics Roderic Hill Building Imperial College London South Kensington Campus London SW7 2AZ Email: c.cantwell@imperial.ac.uk www.imperial.ac.uk/people/c.cantwell
Dear All, I've compiled the code with Debug mode run the code with gdb and got the backtrace about my problem as Dr. Cantwell stated at the mail below. I'm sending the backtrace and .xml file I'm trying to run in my computer. Regards, Kamil 02.10.2014 17:55 tarihinde, Chris Cantwell yazdı:
Dear Kamil,
Unfortunately, the information you provide is not sufficient to diagnose the problem.
Please ensure your code is compiled with CMAKE_BUILD_TYPE=Debug and run the code using a debugger (e.g. gdb). When the error occurs, request a backtrace (command: bt). Please send us the backtrace, along with the XML file you are using.
For a quick introduction to gdb, have a look at http://undergraduate.csse.uwa.edu.au/units/CITS2230/resources/gdb-intro.html
Kind regards, Chris
On 29/09/14 08:44, Kamil Ozden wrote:
Dear All,
About 3 weeks ago I made an update in my computer and after that installed the last version of Nektar in the repository without problem. However, after this installation when I tried to run an analysis with an xml file including Curved edges I got the following error:
Initial Conditions: - Field u: 0 - Field v: 0 - Field w: 1 - Field p: 0 Writing: "Re100_v11_2_0.chk" [Dell-Workstation:56500] *** Process received signal *** [Dell-Workstation:56500] Signal: Segmentation fault (11) [Dell-Workstation:56500] Signal code: Address not mapped (1) [Dell-Workstation:56500] Failing at address: 0x9a1b000 [Dell-Workstation:56500] [ 0] /lib/x86_64-linux-gnu/libc.so.6(+0x36c30) [0x7f5d2d442c30] [Dell-Workstation:56500] [ 1] /usr/lib/libblas.so.3(dgemm_incopy_NEHALEM+0x39e) [0x7f5d2e9a979e] [Dell-Workstation:56500] *** End of error message *** Segmentation fault (core dumped)
What may be the reason for this error?
Regards, Kamil
_______________________________________________ Nektar-users mailing list Nektar-users@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/nektar-users
participants (3)
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                Chris Cantwell
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                Kamil Ozden
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                Kamil ÖZDEN