Hi Fabian,

Do you have some details regarding the mesh - e.g. number of element, etc.?


Regards,
Gianmarco




Sent from my Samsung device


-------- Original message --------
From: "Selbach, Fabian" <fabian.selbach@student.uni-siegen.de>
Date: 06/07/2016 17:18 (GMT+00:00)
To: nektar-users <nektar-users@imperial.ac.uk>
Subject: [Nektar-users] Problem 3D CompressibleFlowSolver

Hello,

i need your feedback about the simulation of a 3 dimensional flow around a cylinder or a NACA-profile with the CompressibleFlowSolver of the NavierStokesCFE or the EulerCFE.
In every case the simulation starts, but always ends at the point of "Writing: "file_0.chk" " due to time-limit of the Cluster (limited to 1 day). I tried several times.
The parameters, Solver Info and so on were shown (see below). In 2D there is not such a problem.

So my question is, if it depends on the calculation capacity (CPU etc.) or what the reason for this? Actually iam calculating on a Cluster with 10 nodes and 120 CPUs. I think, that the calculation normally should be faster and another time-step should be done after one day or is it normal to a 3D-simulation with the compressible solver? So please can you give me an advice about the Problem?

For example the 3D-problem of the cylinder with the CompressibleFlowSolver with the NavierStokesCFE produces this output after one day of calculation:
(The example with the cylinder is exact the same you published at this page: http://www.nektar.info/compressible-flow/ )


Parameters:
        ALPHA = 0
        CINF = 294.827
        CP = 1004.7
        FINTIME = 2
        GAMMA = 1.4
        GASCONSTANT = 287.058
        IO_CHECKSTEPS = 50000
        IO_INFOSTEPS = 1
        KAPPA = 0.1
        L = 1
        MACH = 0.1
        MU = 0.00275172
        MU0 = 0.5
        NUMSTEPS = 2e+06
        PINF = 22600
        PR = 0.72
        RE = 3900
        RHOINF = 0.364
        SKAPPA = -2.3
        THERMALCONDUCTIVITY = 3.83981
        TIMESTEP = 1e-06
        TINF = 216.29
        TWALL = 216.29
        UINF = 29.4827
        VINF = 0
        WINF = 0

Solver Info:
        ADVECTIONTYPE = WeakDG
        DIFFUSIONTYPE = LDGNS
        DRIVER = Standard
        EQTYPE = NavierStokesCFE
        EVOLUTIONOPERATOR = Nonlinear
        GLOBALMATRIXSTORAGETYPE = SmvBSR
        GLOBALSYSSOLN = IterativeStaticCond
        LINEARPRECONSOLVER = Xxt
        LOCALMATRIXSTORAGESTRATEGY = Sparse
        PRECONDITIONER = Diagonal
        PROBLEMTYPE = General
        PROJECTION = DisContinuous
        TIMEINTEGRATIONMETHOD = RungeKutta2_ImprovedEuler
        UPWINDTYPE = ExactToro
        VISCOSITYTYPE = Variable

gs_setup: 240784 unique labels shared
   pairwise times (avg, min, max): 0.000148432 0.000120687 0.000157881
   crystal router                : 0.000947791 0.000929117 0.000967693
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 241216 152740 313476
   buffer bytes (avg, min, max): 160523 101632 208640
gs_setup: 1187072 unique labels shared
   pairwise times (avg, min, max): 0.000483757 0.000410008 0.000513387
   crystal router                : 0.0109781 0.0108864 0.01108
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 1.18751e+06 656164 1481220
   buffer bytes (avg, min, max): 791381 437248 987136
gs_setup: 240784 unique labels shared
   pairwise times (avg, min, max): 0.000113803 9.51052e-05 0.000123191
   crystal router                : 0.000868803 0.000849199 0.000890398
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 241216 152740 313476
   buffer bytes (avg, min, max): 160523 101632 208640
gs_setup: 1187072 unique labels shared
   pairwise times (avg, min, max): 0.000463862 0.000412512 0.000496101
   crystal router                : 0.00953256 0.00941629 0.0096302
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 1.18751e+06 656164 1481220
   buffer bytes (avg, min, max): 791381 437248 987136
gs_setup: 240784 unique labels shared
   pairwise times (avg, min, max): 0.000115333 9.5892e-05 0.000125098
   crystal router                : 0.00325584 0.0032357 0.0032764
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 241216 152740 313476
   buffer bytes (avg, min, max): 160523 101632 208640
gs_setup: 1187072 unique labels shared
   pairwise times (avg, min, max): 0.00103487 0.00097959 0.00105419
   crystal router                : 0.00855757 0.00837069 0.0108672
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 1.18751e+06 656164 1481220
   buffer bytes (avg, min, max): 791381 437248 987136
gs_setup: 240784 unique labels shared
   pairwise times (avg, min, max): 0.000114435 8.49009e-05 0.000136399
   crystal router                : 0.00204957 0.0020185 0.00207429
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 241216 152740 313476
   buffer bytes (avg, min, max): 160523 101632 208640
gs_setup: 1187072 unique labels shared
   pairwise times (avg, min, max): 0.000471148 0.0004215 0.000498414
   crystal router                : 0.00977638 0.0085747 0.0109815
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 1.18751e+06 656164 1481220
   buffer bytes (avg, min, max): 791381 437248 987136
gs_setup: 240784 unique labels shared
   pairwise times (avg, min, max): 0.000113707 9.59873e-05 0.000121403
   crystal router                : 0.000872626 0.000852704 0.00089221
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 241216 152740 313476
   buffer bytes (avg, min, max): 160523 101632 208640
gs_setup: 1187072 unique labels shared
   pairwise times (avg, min, max): 0.000467315 0.000390005 0.000493503
   crystal router                : 0.010846 0.0107322 0.0109444
   used all_to_all method: pairwise
   handle bytes (avg, min, max): 1.18751e+06 656164 1481220
   buffer bytes (avg, min, max): 791381 437248 987136
=======================================================================
                EquationType: NavierStokesCFE
                Session Name: Cylinder_NS_3D
                Spatial Dim.: 3
          Max SEM Exp. Order: 4
              Expansion Dim.: 3
              Riemann Solver: ExactToro
              Advection Type:
             Projection Type: Discontinuous Galerkin
              Diffusion Type:
                   Advection: explicit
               AdvectionType: WeakDG
                   Diffusion: explicit
                   Time Step: 1e-06
                No. of Steps: 2000000
         Checkpoints (steps): 50000
            Integration Type: RungeKutta2_ImprovedEuler
                Problem Type: General
=======================================================================
Initial Conditions:
  - Field rho: rhoInf
  - Field rhou: rhoInf * uInf
  - Field rhov: rhoInf * vInf
  - Field rhow: rhoInf * wInf
  - Field E: pInf / (Gamma - 1) + 0.5 * rhoInf * (uInf * uInf + vInf * vInf + wInf * wInf)
Writing: "Cylinder_NS_3D_0.chk"
slurmstepd: *** JOB 930941 CANCELLED AT 2016-07-06T03:27:36 DUE TO TIME LIMIT ***


I run the solver by:

"mpirun -np 120 CompressibleFlowSolver -v 3D_cylinder_mesh.xml 3D_cylinder_conditions.xml"

Thanks for any hint. If you need more information, please let me know .
 
Best regards

Fabian Selbach
University of Siegen
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