Dear all,
I am having troubles compiling nektar 4.4.1 on Centos 7. I linked it with MKL, and was able to compile it, but it failed from test 5 till the last test (test 1 to 4 were successful though).
My cmake command was
”cmake\ ziji@medusa0
-DCMAKE_CXX_FLAGS_RELEASE=" -I${MKLROOT}/include " \
-DNEKTAR_USE_MKL=ON \
-DMKL_LAPACK=${MKLROOT}/lib/intel64/libmkl_lapack95_lp64.a \
-DNEKTAR_USE_MPI=ON ..
”
I have tried linked with ThirdParty Boost following the FAQ page, but it does not help. I suspect the error was from linking with MKL? The deatailed error message was attached below.
Start 4: Collections
4: Test command: /home/public/nektar/nektar++-4.4.1/build/library/UnitTests/Collections/CollectionsUnitTests "--detect_memory_leaks=0"
4: Test timeout computed to be: 9.99988e+06
4: Running 160 test cases...
4:
4: *** No errors detected
4/436 Test #4: Collections ....................................................................... Passed 0.37 sec
test 5
Start 5: LibUtilities_NodalDemo_Tri_Deriv_P8
5: Test command: /home/public/nektar/nektar++-4.4.1/build/tests/Tester "/home/public/nektar/nektar++-4.4.1/library/Demos/LibUtilities/Tests/NodalDemo_Tri_Deriv_P8.tst"
5: Test timeout computed to be: 9.99988e+06
5: Error occurred running test:
5: Command: NodalDemo-g --order 8 --type 22 --deriv 1>output.out 2>output.err
5: === Output ===
5:
5: === Errors ===
5: sh: NodalDemo-g: command not found
5:
5/436 Test #5: LibUtilities_NodalDemo_Tri_Deriv_P8 ...............................................***Failed 0.02 sec
Error occurred running test:
Command: NodalDemo-g --order 8 --type 22 --deriv 1>output.out 2>output.err
=== Output ===
=== Errors ===
sh: NodalDemo-g: command not found
test 6
Start 6: LibUtilities_NodalDemo_Tri_Integral_P6
6: Test command: /home/public/nektar/nektar++-4.4.1/build/tests/Tester "/home/public/nektar/nektar++-4.4.1/library/Demos/LibUtilities/Tests/NodalDemo_Tri_Integral_P6.tst"
6: Test timeout computed to be: 9.99988e+06
6: Error occurred running test:
6: Command: NodalDemo-g --order 6 --type 23 --integral 1>output.out 2>output.err
6: === Output ===
6:
6: === Errors ===
6: sh: NodalDemo-g: command not found
6:
6/436 Test #6: LibUtilities_NodalDemo_Tri_Integral_P6 ............................................***Failed 0.02 sec
Error occurred running test:
Command: NodalDemo-g --order 6 --type 23 --integral 1>output.out 2>output.err
=== Output ===
=== Errors ===
sh: NodalDemo-g: command not found
Any help to resolve this issue or suggestions will be greatly appreciated. Thank you!
Best Regards,
Ziji