All, Once again I am failing to install petsc at all when I try to install firedrake. I’m including the firedrake install log. Thanks, Beth Beth Wingate b.wingate@exeter.ac.uk<mailto:b.wingate@exeter.ac.uk> The world is but a canvas to the imagination - Thoreau
Hi Beth,
On 7 Apr 2017, at 13:22, Wingate, Beth <B.Wingate@exeter.ac.uk> wrote:
All,
Once again I am failing to install petsc at all when I try to install firedrake. I’m including the firedrake install log.
Thanks, there was a bug in petsc configure which I reported, but I hadn't updated our branch pointer to incorporate the fix. If you try again now (wiping the firedrake directory first), I hope it should work. Lawrence
Great! I've followed your advice and pets got a lot further this time. I'm attaching the output file from the screen. Beth ________________________________ From: firedrake-bounces@imperial.ac.uk <firedrake-bounces@imperial.ac.uk> on behalf of Lawrence Mitchell <lawrence.mitchell@imperial.ac.uk> Sent: 07 April 2017 13:26:22 To: firedrake@imperial.ac.uk Subject: Re: [firedrake] Bug report Hi Beth,
On 7 Apr 2017, at 13:22, Wingate, Beth <B.Wingate@exeter.ac.uk> wrote:
All,
Once again I am failing to install petsc at all when I try to install firedrake. I’m including the firedrake install log.
Thanks, there was a bug in petsc configure which I reported, but I hadn't updated our branch pointer to incorporate the fix. If you try again now (wiping the firedrake directory first), I hope it should work. Lawrence _______________________________________________ firedrake mailing list firedrake@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/firedrake
Hi Beth,
On 7 Apr 2017, at 13:40, Wingate, Beth <B.Wingate@exeter.ac.uk> wrote:
Great!
I've followed your advice and pets got a lot further this time. I'm attaching the output file from the screen.
I think this is a breakage due to incompatible updates that mercurial pushed out. Can you do: $ hg version If that works successfully, what about: $ hg clone https://bitbucket.org/eigen/eigen/ Thanks, Lawrence
That worked. Should I run firedrake-update? On Apr 7, 2017, at 2:01 PM, Lawrence Mitchell <lawrence.mitchell@imperial.ac.uk<mailto:lawrence.mitchell@imperial.ac.uk>> wrote: hg clone https://bitbucket.org/eigen/eigen/ Beth Wingate b.wingate@exeter.ac.uk<mailto:b.wingate@exeter.ac.uk> The world is but a canvas to the imagination - Thoreau
On 7 Apr 2017, at 14:24, Wingate, Beth <B.Wingate@exeter.ac.uk> wrote:
That worked. Should I run firedrake-update?
No, it turns out this is a more difficult issue. Somehow the current version of Eigen which PETSc wants to download fails to install properly, which causes the error. I will report a bug upstream and get back to the list when things are likely to be working again. Cheers, Lawrence
Thanks Lawrence. -Beth On Apr 7, 2017, at 2:30 PM, Lawrence Mitchell <lawrence.mitchell@imperial.ac.uk<mailto:lawrence.mitchell@imperial.ac.uk>> wrote: On 7 Apr 2017, at 14:24, Wingate, Beth <B.Wingate@exeter.ac.uk<mailto:B.Wingate@exeter.ac.uk>> wrote: That worked. Should I run firedrake-update? No, it turns out this is a more difficult issue. Somehow the current version of Eigen which PETSc wants to download fails to install properly, which causes the error. I will report a bug upstream and get back to the list when things are likely to be working again. Cheers, Lawrence _______________________________________________ firedrake mailing list firedrake@imperial.ac.uk<mailto:firedrake@imperial.ac.uk> https://mailman.ic.ac.uk/mailman/listinfo/firedrake Beth Wingate b.wingate@exeter.ac.uk<mailto:b.wingate@exeter.ac.uk> The world is but a canvas to the imagination - Thoreau
I am also having this issue with PETSc failing on --download-eigen on my local cluster. Is having Eigen necessary if I just want to solve a simple poisson equation on extruded meshes? Or will firedrake fail to install properly without it? On Fri, Apr 7, 2017 at 8:33 AM, Wingate, Beth <B.Wingate@exeter.ac.uk> wrote:
Thanks Lawrence. -Beth
On Apr 7, 2017, at 2:30 PM, Lawrence Mitchell <lawrence.mitchell@imperial. ac.uk> wrote:
On 7 Apr 2017, at 14:24, Wingate, Beth <B.Wingate@exeter.ac.uk> wrote:
That worked. Should I run firedrake-update?
No, it turns out this is a more difficult issue. Somehow the current version of Eigen which PETSc wants to download fails to install properly, which causes the error. I will report a bug upstream and get back to the list when things are likely to be working again.
Cheers,
Lawrence _______________________________________________ firedrake mailing list firedrake@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/firedrake
Beth Wingate b.wingate@exeter.ac.uk The world is but a canvas to the imagination - Thoreau
_______________________________________________ firedrake mailing list firedrake@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/firedrake
On 9 Apr 2017, at 21:57, Justin Chang <jychang48@gmail.com> wrote:
I am also having this issue with PETSc failing on --download-eigen on my local cluster. Is having Eigen necessary if I just want to solve a simple poisson equation on extruded meshes? Or will firedrake fail to install properly without it?
It should only be necessary for hybridisation I think. I have reported a bug to petsc-maint so hopefully will have this fixed in a day or two. Lawrence
participants (3)
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Justin Chang
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Lawrence Mitchell
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Wingate, Beth