On second thoughts, I think you're just missing a comma in front of the t=t? On 3 July 2014 18:57, Shipton, Jemma <j.shipton@imperial.ac.uk> wrote:
Hi All,
Sorry to post a question in the chat and then disappear - I'd lost track of time and needed to dash home. Anyway, I've copied and pasted my question...
18:26 < jemma> I have pulled some code Colin added this morning 18:27 < jemma> and it doesn't work - although Colin was quite happily running it before he went to watch tennis 18:27 < jemma> can anyone see why there'd be a problem with this: 18:27 < jemma> u = project(Expression(("1.0 +
sin(pi*(x[0]-t))*sin(pi*x[1])*cos(pi*t/T0)","cos(pi*(x[0]-t))*cos(pi*x[1])*cos(pi*t/T0)")t=t,T0=T0),V1) 18:28 < jemma> where V1 comes from: 18:28 < jemma> V1_v = OuterProductElement(IUh1, IUv0) 18:28 < jemma> V1_h = OuterProductElement(IUh0, IUv1) 18:28 < jemma> V1_elt = HDiv(V1_v) + HDiv(V1_h) 18:28 < jemma> V1 = FunctionSpace(mesh,V1_elt) 18:28 < jemma> t and T0 are defined 18:29 < jemma> maybe I'm missing a ufl/pyop2/something update - I haven't updated in a while...
When I run the code won't even compile:
pyop2.exceptions.CompilationError: Unable to compile code
I've attached the log and err files. The problem seems to be the variables t and T0 in the expression - although they are defined in previous lines:
t = 0.0 T0 = 1.0
The script I'm trying to run is at: https://bitbucket.org/colinjcotter/vertical-tests/src/c1a2a565912564897fdbec...
Thanks!
Jemma
That's just poor copy and pasting! I'll try that branch you mentioned tomorrow...Thanks! ________________________________________ From: firedrake-bounces@imperial.ac.uk [firedrake-bounces@imperial.ac.uk] on behalf of Andrew McRae [a.mcrae12@imperial.ac.uk] Sent: 03 July 2014 21:12 To: firedrake Subject: Re: [firedrake] compile problem On second thoughts, I think you're just missing a comma in front of the t=t? On 3 July 2014 18:57, Shipton, Jemma <j.shipton@imperial.ac.uk<mailto:j.shipton@imperial.ac.uk>> wrote: Hi All, Sorry to post a question in the chat and then disappear - I'd lost track of time and needed to dash home. Anyway, I've copied and pasted my question... 18:26 < jemma> I have pulled some code Colin added this morning 18:27 < jemma> and it doesn't work - although Colin was quite happily running it before he went to watch tennis 18:27 < jemma> can anyone see why there'd be a problem with this: 18:27 < jemma> u = project(Expression(("1.0 + sin(pi*(x[0]-t))*sin(pi*x[1])*cos(pi*t/T0)","cos(pi*(x[0]-t))*cos(pi*x[1])*cos(pi*t/T0)")t=t,T0=T0),V1) 18:28 < jemma> where V1 comes from: 18:28 < jemma> V1_v = OuterProductElement(IUh1, IUv0) 18:28 < jemma> V1_h = OuterProductElement(IUh0, IUv1) 18:28 < jemma> V1_elt = HDiv(V1_v) + HDiv(V1_h) 18:28 < jemma> V1 = FunctionSpace(mesh,V1_elt) 18:28 < jemma> t and T0 are defined 18:29 < jemma> maybe I'm missing a ufl/pyop2/something update - I haven't updated in a while... When I run the code won't even compile: pyop2.exceptions.CompilationError: Unable to compile code I've attached the log and err files. The problem seems to be the variables t and T0 in the expression - although they are defined in previous lines: t = 0.0 T0 = 1.0 The script I'm trying to run is at: https://bitbucket.org/colinjcotter/vertical-tests/src/c1a2a565912564897fdbec... Thanks! Jemma
Should just try trunk firedrake and pyop2 first. Cjc On 3 Jul 2014 21:55, "Shipton, Jemma" <j.shipton@imperial.ac.uk> wrote:
That's just poor copy and pasting! I'll try that branch you mentioned tomorrow...Thanks! ________________________________________ From: firedrake-bounces@imperial.ac.uk [firedrake-bounces@imperial.ac.uk] on behalf of Andrew McRae [a.mcrae12@imperial.ac.uk] Sent: 03 July 2014 21:12 To: firedrake Subject: Re: [firedrake] compile problem
On second thoughts, I think you're just missing a comma in front of the t=t?
On 3 July 2014 18:57, Shipton, Jemma <j.shipton@imperial.ac.uk<mailto: j.shipton@imperial.ac.uk>> wrote: Hi All,
Sorry to post a question in the chat and then disappear - I'd lost track of time and needed to dash home. Anyway, I've copied and pasted my question...
18:26 < jemma> I have pulled some code Colin added this morning 18:27 < jemma> and it doesn't work - although Colin was quite happily running it before he went to watch tennis 18:27 < jemma> can anyone see why there'd be a problem with this: 18:27 < jemma> u = project(Expression(("1.0 +
sin(pi*(x[0]-t))*sin(pi*x[1])*cos(pi*t/T0)","cos(pi*(x[0]-t))*cos(pi*x[1])*cos(pi*t/T0)")t=t,T0=T0),V1) 18:28 < jemma> where V1 comes from: 18:28 < jemma> V1_v = OuterProductElement(IUh1, IUv0) 18:28 < jemma> V1_h = OuterProductElement(IUh0, IUv1) 18:28 < jemma> V1_elt = HDiv(V1_v) + HDiv(V1_h) 18:28 < jemma> V1 = FunctionSpace(mesh,V1_elt) 18:28 < jemma> t and T0 are defined 18:29 < jemma> maybe I'm missing a ufl/pyop2/something update - I haven't updated in a while...
When I run the code won't even compile:
pyop2.exceptions.CompilationError: Unable to compile code
I've attached the log and err files. The problem seems to be the variables t and T0 in the expression - although they are defined in previous lines:
t = 0.0 T0 = 1.0
The script I'm trying to run is at: https://bitbucket.org/colinjcotter/vertical-tests/src/c1a2a565912564897fdbec...
Thanks!
Jemma
On 03/07/14 21:55, Shipton, Jemma wrote:
That's just poor copy and pasting! I'll try that branch you mentioned tomorrow...Thanks! ________________________________________ From: firedrake-bounces@imperial.ac.uk [firedrake-bounces@imperial.ac.uk] on behalf of Andrew McRae [a.mcrae12@imperial.ac.uk] Sent: 03 July 2014 21:12 To: firedrake Subject: Re: [firedrake] compile problem
On second thoughts, I think you're just missing a comma in front of the t=t?
On 3 July 2014 18:57, Shipton, Jemma <j.shipton@imperial.ac.uk<mailto:j.shipton@imperial.ac.uk>> wrote: Hi All,
Sorry to post a question in the chat and then disappear - I'd lost track of time and needed to dash home. Anyway, I've copied and pasted my question...
18:26 < jemma> I have pulled some code Colin added this morning 18:27 < jemma> and it doesn't work - although Colin was quite happily running it before he went to watch tennis 18:27 < jemma> can anyone see why there'd be a problem with this: 18:27 < jemma> u = project(Expression(("1.0 + sin(pi*(x[0]-t))*sin(pi*x[1])*cos(pi*t/T0)","cos(pi*(x[0]-t))*cos(pi*x[1])*cos(pi*t/T0)")t=t,T0=T0),V1) 18:28 < jemma> where V1 comes from: 18:28 < jemma> V1_v = OuterProductElement(IUh1, IUv0) 18:28 < jemma> V1_h = OuterProductElement(IUh0, IUv1) 18:28 < jemma> V1_elt = HDiv(V1_v) + HDiv(V1_h) 18:28 < jemma> V1 = FunctionSpace(mesh,V1_elt) 18:28 < jemma> t and T0 are defined 18:29 < jemma> maybe I'm missing a ufl/pyop2/something update - I haven't updated in a while...
When I run the code won't even compile:
pyop2.exceptions.CompilationError: Unable to compile code
I've attached the log and err files. The problem seems to be the variables t and T0 in the expression - although they are defined in previous lines:
t = 0.0 T0 = 1.0
The script I'm trying to run is at: https://bitbucket.org/colinjcotter/vertical-tests/src/c1a2a565912564897fdbec...
I think this is because your firedrake is not up-to-date enough. The Expressions with user-defined variables arrived on 20th of May. If you do git branch --contains 2ad90e5 you can see if your local firedrake branch has it (you may not be up-to-date enough). Running with current firedrake master this test case works for me. I also note that that script is not making best use of the user-defined variables. You can define the Expression before the timestepping loop and then just update values inside it (rather than redefining the Expression): e.g. uexpr = Expression(..., t=t, T0=T0) u = project(uexpr, V) while t < T: uexpr.t = t u.project(uexpr) Cheers, Lawrence
Thanks Lawrence - it's running fine now and I'll make the change you've suggested too… J ----------------------------------------------------------------------------------------------------- I think this is because your firedrake is not up-to-date enough. The Expressions with user-defined variables arrived on 20th of May. If you do git branch --contains 2ad90e5 you can see if your local firedrake branch has it (you may not be up-to-date enough). Running with current firedrake master this test case works for me. I also note that that script is not making best use of the user-defined variables. You can define the Expression before the timestepping loop and then just update values inside it (rather than redefining the Expression): e.g. uexpr = Expression(..., t=t, T0=T0) u = project(uexpr, V) while t < T: uexpr.t = t u.project(uexpr) Cheers, Lawrence
participants (4)
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                Andrew McRae
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                Colin Cotter
- 
                
                Lawrence Mitchell
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                Shipton, Jemma