Install failing on PETSc build
Hi, The install script keeps failing for me whenever it tries to build PETSc, what should I do to fix this? Thanks Will
Looks more like a python/pip problem than a PETSc one. Whatever python/pip you're using appears to require root access, hence the "[Errno 13] Permission denied: " error message at the end. You probably need to use a local version of python/pip on your cluster. What I have done in the past is load the python module provided by the cluster, then run python get-pip.py to install a local version of pip. On Thu, Oct 26, 2017 at 8:20 AM, William Booker [RPG] <scwb@leeds.ac.uk> wrote:
Hi,
The install script keeps failing for me whenever it tries to build PETSc, what should I do to fix this? Thanks Will
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I've used get-pip.py to install a local version. Install currently fails with the attached errors. Will ________________________________ From: firedrake-bounces@imperial.ac.uk <firedrake-bounces@imperial.ac.uk> on behalf of Justin Chang <jychang48@gmail.com> Sent: 26 October 2017 20:31:49 To: Firedrake Project Subject: Re: [firedrake] Install failing on PETSc build Looks more like a python/pip problem than a PETSc one. Whatever python/pip you're using appears to require root access, hence the "[Errno 13] Permission denied: " error message at the end. You probably need to use a local version of python/pip on your cluster. What I have done in the past is load the python module provided by the cluster, then run python get-pip.py to install a local version of pip. On Thu, Oct 26, 2017 at 8:20 AM, William Booker [RPG] <scwb@leeds.ac.uk<mailto:scwb@leeds.ac.uk>> wrote: Hi, The install script keeps failing for me whenever it tries to build PETSc, what should I do to fix this? Thanks Will _______________________________________________ firedrake mailing list firedrake@imperial.ac.uk<mailto:firedrake@imperial.ac.uk> https://mailman.ic.ac.uk/mailman/listinfo/firedrake
On 1 Nov 2017, at 15:42, William Booker [RPG] <scwb@leeds.ac.uk> wrote:
I've used get-pip.py to install a local version. Install currently fails with the attached errors.
shutil.Error: [('/nobackup/scwb/firedrake/main/firedrake/src/petsc/.git/objects/pack/pack-6d3a7f80acaf7774fe327e67184c09ffdd99bff2.pack', '/tmp/pip-buujfyhw-build/.git/objects/pack/pack-6d3a7f80acaf7774fe327e67184c09ffdd99bff2.pack', "[Errno 13] Permission denied: '/tmp/pip-buujfyhw-build/.git/objects/pack/pack-6d3a7f80acaf7774fe327e67184c09ffdd99bff2.pack'"), ('/nobackup/scwb/firedrake/main/firedrake/src/petsc/.git/objects/pack/pack-6d3a7f80acaf7774fe327e67184c09ffdd99bff2.idx', '/tmp/pip-buujfyhw-build/.git/objects/pack/pack-6d3a7f80acaf7774fe327e67184c09ffdd99bff2.idx', "[Errno 13] Permission denied: '/tmp/pip-buujfyhw-build/.git/objects/pack/pack-6d3a7f80acaf7774fe327e67184c09ffdd99bff2.idx'")] You couldn't write some files. Why not? Disk quota? Disk full? Permissions wrong? Who knows. Lawrence
participants (3)
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                Justin Chang
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                Lawrence Mitchell
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                William Booker [RPG]