Running the test suite fails because your installation has failed. The install script should generate a `firedrake-install.log` file. That is what we need, so please send us that. Note that running the install script again after a failed attempt could be problematic. What you should do is delete and remove the entire `firedrake` directory from the failed installation and rerun the installation. Once that supposedly fails, send us the `.log` file. Best regards, - Thomas ________________________________ From: firedrake-bounces@imperial.ac.uk <firedrake-bounces@imperial.ac.uk> on behalf of Emmanuel Yarleque Medina <eyarmed@gmail.com> Sent: 14 September 2018 19:24:35 To: firedrake Subject: [firedrake] Help me The installation error is attached in ubuntu 17.04LTS
El mar., 18 sept. 2018 a las 11:31, Gibson, Thomas (< t.gibson15@imperial.ac.uk>) escribió:
Running the test suite fails because your installation has failed. The install script should generate a `firedrake-install.log` file. That is what we need, so please send us that.
Note that running the install script again after a failed attempt could be problematic. What you should do is delete and remove the entire `firedrake` directory from the failed installation and rerun the installation. Once that supposedly fails, send us the `.log` file.
Best regards,
- Thomas ------------------------------ *From:* firedrake-bounces@imperial.ac.uk <firedrake-bounces@imperial.ac.uk> on behalf of Emmanuel Yarleque Medina <eyarmed@gmail.com> *Sent:* 14 September 2018 19:24:35 *To:* firedrake *Subject:* [firedrake] Help me
The installation error is attached in ubuntu 17.04LTS _______________________________________________ firedrake mailing list firedrake@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/firedrake
Hi Emmanuel,
On 19 Sep 2018, at 01:50, Emmanuel Yarleque Medina <eyarmed@gmail.com> wrote:
The relevant error here is: firedrake/hdf5interface.c:566:18: fatal error: hdf5.h: Arquivo ou diretório não encontrado #include "hdf5.h" I see you used "firedrake-install --honour-petsc-dir". This is possible, but you need to ensure that the PETSc you build is compatible with Firedrake, and installs a correct minimal set of optional packages. In this case, it looks your PETSc does not include support for HDF5. The easiest way to fix this is to try letting the installer build PETSc for you: this won't interfere with any existing PETSc installation. It is possible to build PETSc correctly in a standalone manner, but it's slightly more involved. Is there a reason you want to use an existing installed PETSc version? Cheers, Lawrence
participants (3)
-
Emmanuel Yarleque Medina
-
Gibson, Thomas
-
Lawrence Mitchell