Dear Lawrence, I get: $ ldd /home/ cougarnet.uh.edu/msarrafj/Software/firedrake/src/PyOP2/pyop2/sparsity.cpython-36m-x86_64-linux-gnu.so linux-vdso.so.1 => (0x00007ffc197fc000) libpetsc.so.3.8 => /lib64/libpetsc.so.3.8 (0x00007f0bfb6b8000) libpython3.6m.so.1.0 => /lib64/libpython3.6m.so.1.0 (0x00007f0bfb18f000) libpthread.so.0 => /lib64/libpthread.so.0 (0x00007f0bfaf73000) libc.so.6 => /lib64/libc.so.6 (0x00007f0bfabb0000) libgfortran.so.3 => /lib64/libgfortran.so.3 (0x00007f0bfa88d000) libsuperlu.so.5.1 => /lib64/libsuperlu.so.5.1 (0x00007f0bfa618000) libumfpack.so.5 => /lib64/libumfpack.so.5 (0x00007f0bfa363000) libklu.so.1 => /lib64/libklu.so.1 (0x00007f0bfa12e000) libcholmod.so.2 => /lib64/libcholmod.so.2 (0x00007f0bf9e42000) libamd.so.2 => /lib64/libamd.so.2 (0x00007f0bf9c38000) libopenblas.so.0 => /lib64/libopenblas.so.0 (0x00007f0bf7767000) libX11.so.6 => /lib64/libX11.so.6 (0x00007f0bf7429000) libm.so.6 => /lib64/libm.so.6 (0x00007f0bf7127000) libdl.so.2 => /lib64/libdl.so.2 (0x00007f0bf6f22000) libstdc++.so.6 => /lib64/libstdc++.so.6 (0x00007f0bf6c1a000) libgcc_s.so.1 => /lib64/libgcc_s.so.1 (0x00007f0bf6a04000) libutil.so.1 => /lib64/libutil.so.1 (0x00007f0bf6800000) /lib64/ld-linux-x86-64.so.2 (0x000055a8504ca000) libquadmath.so.0 => /lib64/libquadmath.so.0 (0x00007f0bf65c4000) libsatlas.so.3 => /usr/lib64/atlas/libsatlas.so.3 (0x00007f0bf59af000) libsuitesparseconfig.so.4 => /lib64/libsuitesparseconfig.so.4 (0x00007f0bf57ac000) libcolamd.so.2 => /lib64/libcolamd.so.2 (0x00007f0bf55a4000) libbtf.so.1 => /lib64/libbtf.so.1 (0x00007f0bf53a0000) libcamd.so.2 => /lib64/libcamd.so.2 (0x00007f0bf5194000) libccolamd.so.2 => /lib64/libccolamd.so.2 (0x00007f0bf4f88000) libxcb.so.1 => /lib64/libxcb.so.1 (0x00007f0bf4d60000) libXau.so.6 => /lib64/libXau.so.6 (0x00007f0bf4b5b000) Thanks for your help, Mohammad Mohammad Sarraf Joshaghani Phone: +1-281-781-5331 On Fri, Apr 20, 2018 at 3:18 AM, Lawrence Mitchell < lawrence.mitchell@imperial.ac.uk> wrote:
Hi Mohammad,
this is strange, everything looked to have installed fine.
ImportError: /home/cougarnet.uh.edu/msarrafj/Software/firedrake/
src/PyOP2/pyop2/sparsity.cpython-36m-x86_64-linux-gnu.so: undefined symbol: PetscMallocA
What does:
ldd /home/cougarnet.uh.edu/msarrafj/Software/firedrake/ src/PyOP2/pyop2/sparsity.cpython-36m-x86_64-linux-gnu.so
Say?
Thanks,
Lawrence _______________________________________________ firedrake mailing list firedrake@imperial.ac.uk https://mailman.ic.ac.uk/mailman/listinfo/firedrake