This gave me the following error: Installing GLPK Updating the git repository for glpk No need to rebuild glpk Installing libspatialindex Updating the git repository for libspatialindex Traceback (most recent call last): File "../bin/firedrake-update", line 1214, in <module> build_and_install_libspatialindex() File "../bin/firedrake-update", line 799, in build_and_install_libspatialindex check_call(["./autogen.sh"]) File "../bin/firedrake-update", line 357, in check_call log.debug(subprocess.check_output(arguments, stderr=subprocess.STDOUT, env=env)) File "/opt/firedrake/python/2.7.9/lib/python2.7/subprocess.py", line 573, in check_output raise CalledProcessError(retcode, cmd, output=output) subprocess.CalledProcessError: Command '['./autogen.sh']' returned non-zero exit status 1 Log is attached. Thanks Will ________________________________ From: firedrake-bounces@imperial.ac.uk <firedrake-bounces@imperial.ac.uk> on behalf of Lawrence Mitchell <lawrence.mitchell@imperial.ac.uk> Sent: 07 June 2017 11:23:11 To: firedrake@imperial.ac.uk Subject: Re: [firedrake] firedrake-update failed On 07/06/17 11:17, William Booker wrote:
Dear Firedrakers,
Attached the log for a failed firedrake update. What should I do to work around this?
Please do: pip uninstall petsc cd firedrake/src/petsc git clean -fdx firedrake-update --rebuild Thanks, Lawrence