************************************************************************************************************************ *** WIDEN YOUR WINDOW TO 120 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** ************************************************************************************************************************ ---------------------------------------------- PETSc Performance Summary: ---------------------------------------------- soliton_improved.py on a arch-python-macosx-10.9-x86_64 named campus-10-41-51-182.wireless.leeds.ac.uk with 1 processor, by mmfg Mon Mar 14 17:39:57 2016 Using Petsc Development GIT revision: v3.5.2-5362-ge27b282 GIT Date: 2015-11-25 10:33:47 +0000 Max Max/Min Avg Total Time (sec): 1.894e+03 1.00000 1.894e+03 Objects: 2.314e+04 1.00000 2.314e+04 Flops: 3.605e+12 1.00000 3.605e+12 3.605e+12 Flops/sec: 1.904e+09 1.00000 1.904e+09 1.904e+09 MPI Messages: 0.000e+00 0.00000 0.000e+00 0.000e+00 MPI Message Lengths: 0.000e+00 0.00000 0.000e+00 0.000e+00 MPI Reductions: 0.000e+00 0.00000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flops ----- --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total counts %Total Avg %Total counts %Total 0: Main Stage: 1.8936e+03 100.0% 3.6055e+12 100.0% 0.000e+00 0.0% 0.000e+00 0.0% 0.000e+00 0.0% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flops: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent Avg. len: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flops in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flops over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flops --- Global --- --- Stage --- Total Max Ratio Max Ratio Max Ratio Mess Avg len Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage VecDot 716 1.0 1.6898e-01 1.0 2.20e+08 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1303 VecMDot 14302 1.0 1.3516e+01 1.0 2.62e+10 1.0 0.0e+00 0.0e+00 0.0e+00 1 1 0 0 0 1 1 0 0 0 1935 VecTDot 8592 1.0 3.5221e-01 1.0 6.67e+08 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1894 VecNorm 23610 1.0 2.3879e+00 1.0 5.94e+09 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2490 VecScale 16092 1.0 1.7771e+00 1.0 2.47e+09 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1393 VecCopy 15039 1.0 1.9924e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 10840 1.0 5.7828e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 12888 1.0 1.2359e+00 1.0 1.66e+09 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1342 VecAYPX 2864 1.0 1.6288e-01 1.0 2.22e+08 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1365 VecWAXPY 716 1.0 2.3257e-01 1.0 1.10e+08 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 473 VecMAXPY 16092 1.0 1.6906e+01 1.0 3.06e+10 1.0 0.0e+00 0.0e+00 0.0e+00 1 1 0 0 0 1 1 0 0 0 1808 VecReduceArith 1432 1.0 1.8472e-01 1.0 4.40e+08 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2384 VecReduceComm 716 1.0 7.1406e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecNormalize 16092 1.0 3.7773e+00 1.0 7.42e+09 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1966 MatMult 19314 1.0 8.0652e+01 1.0 7.39e+10 1.0 0.0e+00 0.0e+00 0.0e+00 4 2 0 0 0 4 2 0 0 0 916 MatSolve 21820 1.0 9.5678e+01 1.0 7.99e+10 1.0 0.0e+00 0.0e+00 0.0e+00 5 2 0 0 0 5 2 0 0 0 835 MatLUFactorNum 2151 1.0 4.8821e+01 1.0 1.88e+10 1.0 0.0e+00 0.0e+00 0.0e+00 3 1 0 0 0 3 1 0 0 0 385 MatILUFactorSym 1436 1.0 5.8701e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCopy 1431 1.0 2.7448e+01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 MatConvert 4 1.0 1.0395e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatAssemblyBegin 3587 1.0 1.0824e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatAssemblyEnd 3587 1.0 5.2235e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetRow 55547127 1.0 7.6683e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetRowIJ 1436 1.0 5.2810e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetOrdering 1436 1.0 3.6383e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatZeroEntries 2151 1.0 1.3451e+00 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 PCSetUp 2151 1.0 5.5122e+01 1.0 1.88e+10 1.0 0.0e+00 0.0e+00 0.0e+00 3 1 0 0 0 3 1 0 0 0 341 PCApply 21820 1.0 9.5723e+01 1.0 7.99e+10 1.0 0.0e+00 0.0e+00 0.0e+00 5 2 0 0 0 5 2 0 0 0 834 KSPGMRESOrthog 14302 1.0 2.7921e+01 1.0 5.23e+10 1.0 0.0e+00 0.0e+00 0.0e+00 1 1 0 0 0 1 1 0 0 0 1874 KSPSetUp 3222 1.0 2.3432e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 3222 1.0 2.6516e+02 1.0 2.36e+11 1.0 0.0e+00 0.0e+00 0.0e+00 14 7 0 0 0 14 7 0 0 0 890 SNESSolve 2864 1.0 1.5723e+03 1.0 3.61e+12 1.0 0.0e+00 0.0e+00 0.0e+00 83100 0 0 0 83100 0 0 0 2293 SNESFunctionEval 6086 1.0 4.4020e+02 1.0 1.30e+12 1.0 0.0e+00 0.0e+00 0.0e+00 23 36 0 0 0 23 36 0 0 0 2945 SNESJacobianEval 3222 1.0 8.6144e+02 1.0 2.07e+12 1.0 0.0e+00 0.0e+00 0.0e+00 45 57 0 0 0 45 57 0 0 0 2401 SNESLineSearch 716 1.0 9.1570e+01 1.0 2.79e+11 1.0 0.0e+00 0.0e+00 0.0e+00 5 8 0 0 0 5 8 0 0 0 3052 DMPlexInterp 1 1.0 1.4701e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 DMPlexStratify 2 1.0 4.7645e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 DMPlexCreateGmsh 1 1.0 4.1217e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 6 1.0 7.4661e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Memory usage is given in bytes: Object Type Creations Destructions Memory Descendants' Mem. Reports information only for process 0. --- Event Stage 0: Main Stage Container 6 3 1728 0. Viewer 2 1 776 0. Index Set 4319 4318 455461040 0. IS L to G Mapping 2 0 0 0. Section 20 3 2016 0. Vector 10139 10128 1913960720 0. Matrix 2876 2871 13891698992 0. Preconditioner 1436 1436 1447488 0. Krylov Solver 1436 1436 1849312 0. DMKSP interface 2 0 0 0. SNES 1436 1436 1924240 0. SNESLineSearch 1436 1436 1252192 0. DMSNES 2 0 0 0. Distributed Mesh 6 1 4928 0. GraphPartitioner 2 1 612 0. Star Forest Bipartite Graph 15 6 4848 0. Discrete System 6 1 856 0. ======================================================================================================================== Average time to get PetscTime(): 9.53674e-08 #PETSc Option Table entries: -log_summary #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 8 sizeof(void*) 8 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --prefix=/Users/mmfg/firedrake/lib/python2.7/site-packages/petsc PETSC_ARCH=arch-python-macosx-10.9-x86_64 --with-shared-libraries=1 --with-debugging=0 --with-c2html=0 --with-cc=/usr/local/bin/mpicc --with-cxx=/usr/local/bin/mpicxx --with-fc=/usr/local/bin/mpif90 --download-ctetgen --download-triangle --download-chaco --download-hdf5 ----------------------------------------- Libraries compiled on Fri Dec 4 15:53:00 2015 on dyn910-109.guest.ic.ac.uk Machine characteristics: Darwin-13.4.0-x86_64-i386-64bit Using PETSc directory: /private/var/folders/7h/wbj8xp7n3g5cfbr32ctcmwzcy3jf53/T/pip-p4QtFY-build Using PETSc arch: arch-python-macosx-10.9-x86_64 ----------------------------------------- Using C compiler: /usr/local/bin/mpicc -Wall -Wwrite-strings -Wno-strict-aliasing -Wno-unknown-pragmas -Qunused-arguments -g -O3 ${COPTFLAGS} ${CFLAGS} Using Fortran compiler: /usr/local/bin/mpif90 -Wall -Wno-unused-variable -ffree-line-length-0 -Wno-unused-dummy-argument -g -O ${FOPTFLAGS} ${FFLAGS} ----------------------------------------- Using include paths: -I/private/var/folders/7h/wbj8xp7n3g5cfbr32ctcmwzcy3jf53/T/pip-p4QtFY-build/arch-python-macosx-10.9-x86_64/include -I/private/var/folders/7h/wbj8xp7n3g5cfbr32ctcmwzcy3jf53/T/pip-p4QtFY-build/include -I/private/var/folders/7h/wbj8xp7n3g5cfbr32ctcmwzcy3jf53/T/pip-p4QtFY-build/include -I/private/var/folders/7h/wbj8xp7n3g5cfbr32ctcmwzcy3jf53/T/pip-p4QtFY-build/arch-python-macosx-10.9-x86_64/include -I/Users/mmfg/firedrake/lib/python2.7/site-packages/petsc/include -I/opt/X11/include -I/usr/local/Cellar/open-mpi/1.10.1/include ----------------------------------------- Using C linker: /usr/local/bin/mpicc Using Fortran linker: /usr/local/bin/mpif90 Using libraries: -Wl,-rpath,/private/var/folders/7h/wbj8xp7n3g5cfbr32ctcmwzcy3jf53/T/pip-p4QtFY-build/arch-python-macosx-10.9-x86_64/lib -L/private/var/folders/7h/wbj8xp7n3g5cfbr32ctcmwzcy3jf53/T/pip-p4QtFY-build/arch-python-macosx-10.9-x86_64/lib -lpetsc -llapack -lblas -Wl,-rpath,/Users/mmfg/firedrake/lib/python2.7/site-packages/petsc/lib -L/Users/mmfg/firedrake/lib/python2.7/site-packages/petsc/lib -ltriangle -Wl,-rpath,/opt/X11/lib -L/opt/X11/lib -lX11 -lchaco -lhdf5hl_fortran -lhdf5_fortran -lhdf5_hl -lhdf5 -lctetgen -lssl -lcrypto -Wl,-rpath,/usr/local/opt/libevent/lib -L/usr/local/opt/libevent/lib -Wl,-rpath,/usr/local/Cellar/open-mpi/1.10.1/lib -L/usr/local/Cellar/open-mpi/1.10.1/lib -Wl,-rpath,/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/6.0/lib/darwin -L/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/6.0/lib/darwin -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lgfortran -Wl,-rpath,/usr/local/Cellar/gcc/4.9.2_1/lib/gcc/4.9/gcc/x86_64-apple-darwin13.4.0/4.9.2 -L/usr/local/Cellar/gcc/4.9.2_1/lib/gcc/4.9/gcc/x86_64-apple-darwin13.4.0/4.9.2 -Wl,-rpath,/usr/local/Cellar/gcc/4.9.2_1/lib/gcc/4.9 -L/usr/local/Cellar/gcc/4.9.2_1/lib/gcc/4.9 -Wl,-rpath,/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.9.sdk/usr/lib -L/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.9.sdk/usr/lib -lgfortran -lgcc_ext.10.5 -lquadmath -lm -lclang_rt.osx -lmpi_cxx -lc++ -Wl,-rpath,/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/6.0/lib/darwin -L/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/6.0/lib/darwin -lclang_rt.osx -Wl,-rpath,/usr/local/opt/libevent/lib -L/usr/local/opt/libevent/lib -Wl,-rpath,/usr/local/Cellar/open-mpi/1.10.1/lib -L/usr/local/Cellar/open-mpi/1.10.1/lib -ldl -lmpi -lSystem -Wl,-rpath,/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/6.0/lib/darwin -L/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/6.0/lib/darwin -lclang_rt.osx -ldl -----------------------------------------