Hi,
I am a MSc student at Imperial currently trying to use firedrake as part of my final research project. I am operating on a macOS Big Sur (11.2.3). I believe I have the necessary requirements on my system, however part way during building PETSc it broke, and
appears to have an issue with 'pastix'.
Please see attached the log files
The test for the Fortran compiler is failing:
===== Checking linker
Executing: gfortran -c -o /var/folders/t2/nbzzdq_j5pz4g_rm_hmtjc940000gn/T/petsc-0iho1z1q/config.setCompilers/conftest.o -I/var/folders/t2/nbzzdq_j5pz4g_rm_hmtjc940000gn/T/petsc-0iho1z1q/config.setCompilers /var/folders/t2/nbzzdq_j5pz4g_rm_hmtjc940000gn/T/petsc-0iho1z1q/config.setCompilers/conftest.F90
Successful compile:
Source:
program main
end
Executing: gfortran -o /var/folders/t2/nbzzdq_j5pz4g_rm_hmtjc940000gn/T/petsc-0iho1z1q/config.setCompilers/conftest -Wl,-rpath,/usr/local/opt/openblas/lib -L/usr/local/opt/openblas/lib /var/folders/t2/nbzzdq_j5pz4g_rm_hmtjc940000gn/T/petsc-0iho1z1q/config.setCompilers/conftest.o
Possible ERROR while running linker: exit code 1
stderr:
ld: library not found for -lSystem
collect2: error: ld returned 1 exit status
Error testing Fortran compiler: Cannot compile/link FC with gfortran.
Deleting "FC"
The PasTiX library requires a Fortran compiler. It is possible that the OpenBLAS flag is causing this. The Firedrake team can comment on that.
Thanks,
Matt
Any help would be much appreciated.
Cheers,
Calvin
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