May 2018 - FILM-Users - imperial.ac.uk

[FILM-Users 00801] !!!!!!!!!!!! Deletion of Images before Jan 2018 !!!!!!!!!!!!
by Rothery, Stephen M 15 May '18

15 May '18

Dear All We need to clear older data from scratch again so we will be deleting files from before Jan 2018 on Friday Please make sure you have your data backed up Bw Steve FILM - Facility for Imaging by Light Microscopy ************************************************************** Steve Rothery FILM Technician Sir Alexander Fleming Building, desk 403 Imperial College London / South Kensington Exhibition Road London SW7 2AZ Tel +44-(0)207 594 9793 And ICTEM, (L-Block) Room 314 Hammersmith Campus Imperial College London Du Cane Road London, W12 0NN Tel. +44-(0)207 594 1669 E-mail s.rothery(a)imperial.ac.uk<mailto:s.rothery@imperial.ac.uk> Website: http://www.imperial.ac.uk/medicine/facility-for-imaging-by-light-microscopy/ **************************************************************

1 0

[FILM-Users 00800] FW: Molecular Medicine Seminar Series/12pm 15th May 2018/SAF 121
by Bruckbauer, Andreas 10 May '18

10 May '18

FYI, seminar by Dr Aylin Hanyaloglu on Tuesday 15th May 2018, 12:00-1:00pm in SAF Room 121. Best wishes Andreas ---------------------------------------------------- Dr Andreas Bruckbauer FILM facility manager Sir Alexander Fleming Building South Kensington Campus Imperial College London Exhibition Road London, SW7 2AZ SAF 4th floor, open space desk 401 +44 (0)20 7594 2023 a.bruckbauer(a)imperial.ac.uk<mailto:a.bruckbauer@imperial.ac.uk> http://www.imperial.ac.uk/medicine/facility-for-imaging-by-light-microscopy/ ---------------------------------------------------- From: Ying, Liming Sent: 10 May 2018 09:37 To: Bruckbauer, Andreas <a.bruckbauer(a)imperial.ac.uk> Subject: Molecular Medicine Seminar Series/12pm 15th May 2018/SAF 121 Dear Andreas, Please circulate this seminar to all FILM facility users. Thanks, Liming Molecular Medicine National Heart and Lung Institute Faculty of Medicine Imperial College London SAF Building London SW7 2AZ Tel: 020 7594 3132 Email: l.ying(a)imperial.ac.uk<mailto:l.ying@imperial.ac.uk>

1 0

[FILM-Users 00799] NEUBIAS training school registration
by Gaboriau, David C A 09 May '18

09 May '18

Dear Users, There are a couple of days left to register for the NEUBIAS Training Schools in BioImage Analysis in Edinburgh: one for Early Career Investigators (PhD, Post Doc, junior PI) and one for Facility Staff. Please see below for more details. All the best, David David Gaboriau, PhD FILM – Facility for Imaging by Light Microscopy High-Content Microscopy Specialist Sir Alexander Fleming Building, desk 408 Imperial College London / South Kensington Exhibition Road London SW7 2AZ, UK Phone: +44 (0)2075 949 793 Email: d.gaboriau(a)imperial.ac.uk<mailto:d.gaboriau@imperial.ac.uk> Website: http://imperial.ac.uk/imagingfacility Page: http://www.imperial.ac.uk/people/d.gaboriau [https://gallery.mailchimp.com/5b4c6cea3306aead883c5c553/images/719471ca-848…] [https://gallery.mailchimp.com/5b4c6cea3306aead883c5c553/images/67262476-597…] Applications now open! NEUBIAS, the Network of European BioImage Analysts (www.neubias.org<http://www.neubias.org>), is delighted to announce two new Training Schools on BioImage Analysis: * Early Career Investigators (life scientists) * Facility staff (imaging & analysis staff from core-facilities) The focus of training will be on construction and automation of BioImage Analysis workflows, using as examples more than one toolbox and different exercises. The schools will be held in Edinburgh 16-19th of October 2018, hosted by the MRC Centre for Regenerative Medicine/Imaging facility and co-organized by the University of Edinburgh and University of Dundee. NEUBIAS schools are an excellent opportunity to learn from many experts in Bioimage Analysis (we are expecting >30 specialists at the event) and “....a great mix of intensive learning and community networking” (former trainee testimonial!). The schools will include practical sessions and seminars on ImageJ for analysis and publication, scripting/macros in ImageJ and Matlab, Omero, CellProfiler, QuPath, Ilastik, Ethics in Image Analysis and work on own data. - Applications are now open (each school has 20 available seats and ~7 trainers) - Applicants are highly encouraged to bring their own laptops and data. - Within the COST framework, 7 travel grants per school are offered to applicants who qualify. - Registration requires a “letter of motivation” (filled in application form) and later a confirmation of status. - Application deadline: May 11th 2018 - Selection notification: 1st week of June 2018. More information about schools (programme & trainers) and venue, travel & lodge available at our website: www.neubias.org<http://www.neubias.org> -> “Training Schools” http://eubias.org/NEUBIAS/training-schools/eci/ts8-edinburgh-2018/<https://neubias.us15.list-manage.com/track/click?u=5b4c6cea3306aead883c5c55…> http://eubias.org/NEUBIAS/training-schools/staff/ts9-edinburgh-2018/<https://neubias.us15.list-manage.com/track/click?u=5b4c6cea3306aead883c5c55…> We kindly ask that you help us reach all potential interested applicants. on behalf of all NEUBIAS members, of local organizers (Bertrand Verney & Graeme Ball) and programme organizers (Anna Klemm, Laura Murphy, Graeme Ball and Sebastien Herbert) --------------------------------------------------------------- NEUBIAS is an European network of >200 members and 41 countries, which aims to promote the communication between Life Scientists, Instrumentalists, Developers and BioImage Analysts and to establish and promote the role of Bioimage Analysts in Life Science. Our mission includes: - A training programme for 3 different target audiences:”Early Career” researchers, (core) Facility Staff and Bioimage Analysts (running until 2020 - expected 400 trainees and 15 training schools). - Promote different yearly events (NEUBIAS Conference, workshops [training schools], Taggathons) - Online Resources: Repository of tools and workflows e.g. biii.eu<http://biii.eu>, Benchmarking and Sample datasets, Training material and Open Textbook. - A Short Term Scientific Mission mobility programme for Scientists to visit Host Labs and get in depth insights into cutting edge Image Analysis technology. - A “ITC conference grants” programme to support travel for Early career Investigators from Inclusiveness Target Countries to present their work at conferences. - Outreach material. Copyright © 2018 NEUBIAS: Network for European Bioimage Analysts, COST Action CA15124, All rights reserved. You are receiving this email because you are Neubias member, stakeholder or subscribed the Neubias newsletter Our mailing address is: NEUBIAS: Network for European Bioimage Analysts, COST Action CA15124 Institute for Research in Biomedicine (IRB Barcelona) C. Baldiri reixac, 10 Barcelona, 08028 Spain

1 0

[FILM-Users 00798] !!! make sure your data on scratch is safe !!!
by Bruckbauer, Andreas 09 May '18

09 May '18

Dear FILM-users Please make sure you have copied all your data on scratch to a safe space!!! We need ICT to upgrade the software on the server, as users on newer Windows 10 cannot log on to it. The scratch server is only for file transfer and limited temporal storage!!! It might break down at any time and is not backed up, so your data is at risk if not saved to a permanent storage place. We will let you know when the software update will be done, but recommend to safe your data at the earliest opportunity. Best wishes Andreas ---------------------------------------------------- Dr Andreas Bruckbauer FILM facility manager Sir Alexander Fleming Building South Kensington Campus Imperial College London Exhibition Road London, SW7 2AZ SAF 4th floor, open space desk 401 +44 (0)20 7594 2023 a.bruckbauer(a)imperial.ac.uk<mailto:a.bruckbauer@imperial.ac.uk> http://www.imperial.ac.uk/medicine/facility-for-imaging-by-light-microscopy/ ----------------------------------------------------

1 0